Global mangrove deforestation continues but at a much reduced rate of between 0.16% and 0.39% per year. Southeast Asia is a region of concern with mangrove deforestation rates between 3.58% and 8.08%, this in a region containing half of the entire global mangrove forest inventory. The global mangrove deforestation pattern from 2000 to 2012 is one of decreasing rates of deforestation, with many nations essentially stable, with the exception of the largest mangrove-holding region of Southeast Asia. We provide a standardized spatial dataset that monitors mangrove deforestation globally at high spatio-temporal resolutions. These data can be used to drive the mangrove research agenda, particularly as it pertains to monitoring of mangrove carbon stocks and the establishment of baseline local mangrove forest inventories required for payment for ecosystem service initiatives.